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[EP-tech] Debian9 full-upgrade to Debian10 likes to remove eprints
- To: <eprints-tech@ecs.soton.ac.uk>
- Subject: [EP-tech] Debian9 full-upgrade to Debian10 likes to remove eprints
- From: <th.lauke@arcor.de>
- Date: Fri, 4 Dec 2020 15:07:33 +0100
CAUTION: This e-mail originated outside the University of Southampton. Hi folks, when I tried to fully upgrade our server running already minimal system-upgrade 10.6, EPrints should be removed! root@...:/tmp# apt full-upgrade : The following packages will be REMOVED: eprints libcpan-meta-perl libcurl3 libgconf2-4 libllvm3.9 libmariadbclient18 libsensors4 libtirpc1 mariadb-client-10.1 mariadb-client-core-10.1 mariadb-server-10.1 mariadb-server-core-10.1 mysql-server After setting eprints to 'hold', the upgrade fails :( root@...:/tmp# apt-mark hold eprints eprints set on hold. root@...:/tmp# apt full-upgrade Reading package lists... Done Building dependency tree Reading state information... Done Calculating upgrade... Error! Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: eprints : Depends: mysql-server but it is not going to be installed E: Unable to correct problems, you have held broken packages. root@...:/tmp# apt-cache show eprints Package: eprints Version: 3.4.2 Architecture: all Maintainer: EPrints Software <software@eprints.org> Installed-Size: 9218 Depends: perl, libncurses5, libselinux1, libsepol1, apache2, libapache2-mod-perl2, libxml-libxml-perl, libunicode-string-perl, libterm-readkey-perl, libmime-lite-perl, libmime-types-perl, libdigest-sha-perl, libdbd-mysql-perl, libxml-parser-perl, libxml2-dev, libxml-twig-perl, libarchive-any-perl, libjson-perl, lynx, wget, ghostscript | gs, xpdf, antiword, elinks, texlive-base, texlive-base-bin, psutils, imagemagick, adduser, tar (>= 1), gzip (>= 1), mysql-server, mysql-client, unzip, libsearch-xapian-perl, libtex-encode-perl, libconfig-general-perl, liblwp-protocol-https-perl, libtext-unidecode-perl Filename: ./eprints_3.4.2_all.deb Size: 2130750 MD5sum: c532f9d77acd3bc604ee05336a6a162f SHA1: 6f5ab916f3cb4b286931af17f5a33f564013f518 SHA256: 42706f25e26957c0263045e17c14a37de0ce3e62f100320522838930589ee436 Section: web Priority: extra Homepage: https://eur03.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.eprints.org%2Feprints-3.4&data=04%7C01%7Ceprints-tech%40ecs.soton.ac.uk%7C2633ec00b2fa4401bb1908d8985df376%7C4a5378f929f44d3ebe89669d03ada9d8%7C0%7C0%7C637426876564744563%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=hcTshxZB4d8UPZ3K9%2BAeuoc9MyNakT%2FasR0zKqMODYY%3D&reserved=0 Description: Content Management System for Information Archiving EPrints is a web-based content management system. It allows a large number of contributors to share their digital objects/documents with others. Contributors provide descriptive data (metadata) which is dependent on the type of object being deposited (presentations, articles, books etc.). Before being published objects must be accepted by an editor. Users can access published objects through web-page listings, searches, email alerts or via integration with other systems. Description-md5: 12b7c31828418b16207e1702401c238a root@...:/tmp# apt-cache show mysql-server Package: mysql-server Status: install ok installed Priority: optional Section: misc Installed-Size: 8 Maintainer: Ondřej Surý <ondrej@debian.org> Architecture: amd64 Source: mysql-transitional Version: 5.5.9999+default Depends: default-mysql-server Description: MySQL database server binaries and system database setup [transitional] This is a transitional MySQL database that depends on default MySQL database metapackage. It can be safely removed. Description-md5: 9640aa018a23c1a7160742ea78f76557 root@...:/tmp# apt-cache policy eprints eprints: Installed: 3.4.2 Candidate: 3.4.2 Version table: *** 3.4.2 500 500 https://eur03.safelinks.protection.outlook.com/?url=http%3A%2F%2Fdeb.eprints-hosting.org%2F3.4%2Fstable&data=04%7C01%7Ceprints-tech%40ecs.soton.ac.uk%7C2633ec00b2fa4401bb1908d8985df376%7C4a5378f929f44d3ebe89669d03ada9d8%7C0%7C0%7C637426876564744563%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=CCYZMrJSKt2P7DuaCd22UJTfYWfOyA3gf9R7w0%2FpHTY%3D&reserved=0 ./ Packages 100 /var/lib/dpkg/status I think the dependency have to be mysql-server-5.5?! How to avoid a (manual) (re-)installation of EPrints? Many thanks for any suggestions in advance Thomas
- Follow-Ups:
- [EP-tech] Debian9 full-upgrade to Debian10 likes to remove eprints
- From: <th.lauke@arcor.de>
- [EP-tech] Debian9 full-upgrade to Debian10 likes to remove eprints
- References:
- Re: [EP-tech] eprints integration with office365 SMTP
- From: <th.lauke@arcor.de>
- [EP-tech] misconfigured or failed upgrade to 3.4.1?
- From: <th.lauke@arcor.de>
- [EP-tech] perl module update introduced some trouble with entities
- From: <th.lauke@arcor.de>
- Re: [EP-tech] perl module update introduced some trouble with entities
- From: David R Newman <drn@ecs.soton.ac.uk>
- [EP-tech] Antwort: Re: perl module update introduced some trouble with entities
- From: <martin.braendle@uzh.ch>
- [EP-tech] Antwort: Re: Antwort: Re: perl module update introduced some trouble with entities
- From: <martin.braendle@uzh.ch>
- [EP-tech] Debian9 full-upgrade to Debian10 likes to remove eprints
- From: <th.lauke@arcor.de>
- Re: [EP-tech] eprints integration with office365 SMTP
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