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Re: [EP-tech] how to tell eprints to use a proxy server

It seems, from your log message, that the problem is with your perl installation: you are missing the extension XML::LibXML

On Thu, Apr 28, 2016 at 9:43 AM, holger.berth@mdc-berlin.de <holger.berth@mdc-berlin.de> wrote:

Hi Denis,

 

i have created the file, reloaded eprints and restarted the apache, but i get the same error message. Here is the full error message:

 

Unhandled exception in Import::PubMedID: Could not create file parser context f↲

or file "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&ret↲

mode=xml&rettype=full&id=26993800": No such file or directory at /usr/lib64/per↲

l5/XML/LibXML.pm line 929 XML::LibXML::parse_file('XML::LibXML=HASH(0x7f4130b08↲

500)', 'http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=p...') call↲

ed at /usr/share/eprints/perl_lib/EPrints/XML/LibXML.pm line 93 EPrints::XML::_↲

parse_url('URI::http=SCALAR(0x7f41316851d0)') called at /usr/share/eprints/perl↲

_lib/EPrints/XML.pm line 155 EPrints::XML::parse_url() called at /usr/share/epr↲

ints/perl_lib/EPrints/Plugin/Import/PubMedID.pm line 58 EPrints::Plugin::Import↲

::PubMedID::input_fh('EPrints::Plugin::Import::PubMedID=HASH(0x7f41316d5658)', ↲

'dataset', 'EPrints::DataSet=HASH(0x7f412ca76198)', 'fh', 'File::Temp=GLOB(0x7f↲

412e2111a8)', 'user', 'EPrints::DataObj::User=HASH(0x7f4131687630)', 'filename'↲

, undef, ...) called at /usr/share/eprints/perl_lib/EPrints/Plugin/Screen/Im ...

 

Do you have any other idea?

 

Best,

Holger

 

 

--

Holger Berth

IT Web/Database

 

Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association

House 23, Room 228

Robert-Roessle-Str. 10

D-13125 Berlin

 

phone:+49-(0)30-9406 2828

fax: +49-(0)30-9406 49919

it-hotline: +49-(0)30-9406 4440

mail: holger.berth@mdc-berlin.de

web: www.mdc-berlin.de

 

Von: eprints-tech-bounces@ecs.soton.ac.uk [mailto:eprints-tech-bounces@ecs.soton.ac.uk] Im Auftrag von Denis Pitzalis
Gesendet: Donnerstag, 28. April 2016 09:29
An: Eprints Tech Mailing List <eprints-tech@ecs.soton.ac.uk>
Betreff: Re: [EP-tech] how to tell eprints to use a proxy server

 

Hi Holger,

I have created in cfg/cfg.d a file called proxy.pl with the line:

$c->{proxy} = 'http://proxy.yourproxy.org:yourport';

and everything works fine.

Denis

 

On Thu, Apr 28, 2016 at 9:24 AM, holger.berth@mdc-berlin.de <holger.berth@mdc-berlin.de> wrote:

Hi @ all,

 

my new eprints server is behind a firewall in a DMZ. If i will import Items from Pubmed ID i get an error message.

 

-- error : unreachable network --

 

I think eprints dont know how to communicate outside and i have to set a proxy.

 

So how can i tell eprints to use a proxy server?

 

OS: Cent OS 6.7

Eprints Version 3.3.15

 

King regards,

Holger

 


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