EPrints Technical Mailing List Archive

See the EPrints wiki for instructions on how to join this mailing list and related information.

Message: #03955

< Previous (by date) | Next (by date) > | < Previous (in thread) | Next (in thread) > | Messages - Most Recent First | Threads - Most Recent First

[EP-tech] Re: Bazaar command line install

Thanks Peter!

Yes, it seems to be related to the stream it’s receiving. I’m wondering if
the URL is misconfigured somewhere - what address should it be going to to
retrieve the list?

On 19/02/2015 09:58, "peter" <pjw@repositoryservices.co.uk> wrote:

>Hi
>
>To install a bazaar package from the command line you could use Tim's
>gitaar tools available at: https://github.com/eprintsug/gitaar (which
>will help you work wth the rioxx2 github project at
>https://github.com/eprintsug) plus the epm tools from
>https://github.com/eprints/eprints/tree/3.3/tools (n.b. not sure I have
>selected the right branch).
>
>I am assuming that your problem is that it is just the "available"
>screen that is not working i.e. that the other parts of the repository
>are working fine. The reason for this assumption is that it could mean
>that the xml parse errors relate to the data being parsed rather than
>the libxml libraries being used to do the parsing. If that is the case
>then it would be worth using wget to verify what you get when you
>request the available packages from the server that is showing the error
>i.e. do you get valid xml or is the request failing in some way?
>
>If this is your live server then obviously backup all your data before
>changing anything with the bazaar (some packages will tidy up after
>themselves and thus remove any data created using that bazaar package).
>Once you have good backups you can also try looking in your lib/epm dir
>to see what packages are installed/enabled and then use the tools/epm
>utility to disable them N.B. did you read that warning about lost data
>when you disable a bazaar package :)
>
>If my assumption is wrong please ignore the above :)
>
>Thanks
>Peter
>
>
>
>On 19/02/15 09:16, Andrew Beeken wrote:
>> Okay, following up this and doing some research of my own it looks like
>> the GUI is our only option here (trying to get the recently released
>>Rioxx
>> plugin working) - so, let¹s try and get the Bazaar working. I¹ve had a
>> look in the Apache error log and this is what I see:
>>
>> [Thu Feb 19 09:12:40 2015] [error] Empty Stream at
>> /usr/lib/perl5/XML/LibXML.pm line
>> 877\n\tXML::LibXML::parse_fh('XML::LibXML=HASH(0x7f488b4a6f38)',
>> 'GLOB(0x7f488b68a610)') called at /usr/lib/perl5/XML/LibXML/SAX.pm line
>> 99\n\teval {...} called at /usr/lib/perl5/XML/LibXML/SAX.pm line
>> 98\n\tXML::LibXML::SAX::_parse('XML::LibXML::SAX=HASH(0x7f488b4c3d58)')
>> called at /usr/lib/perl5/XML/LibXML/SAX.pm line
>> 
>>54\n\tXML::LibXML::SAX::_parse_bytestream('XML::LibXML::SAX=HASH(0x7f488b
>>4c
>> 3d58)', 'GLOB(0x7f488b68a610)') called at
>> /usr/share/eprints3/perl_lib/XML/SAX/Base.pm line
>> 2602\n\tXML::SAX::Base::parse('XML::LibXML::SAX=HASH(0x7f488b4c3d58)',
>> 'HASH(0x7f488b479630)') called at
>> /usr/share/eprints3/perl_lib/XML/SAX/Base.pm line
>> 
>>2631\n\tXML::SAX::Base::parse_file('XML::LibXML::SAX=HASH(0x7f488b4c3d58)
>>',
>>   'GLOB(0x7f488b68a610)') called at
>> /usr/share/eprints3/perl_lib/EPrints/XML/LibXML.pm line
>> 137\n\tEPrints::XML::event_parse('GLOB(0x7f488b68a610)',
>> 'EPrints::DataObj::SAX::Handler=ARRAY(0x7f488b4d4370)') called at
>> /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 293\n\tEPrints::DataObj::EPM::new_from_file('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'GLOB(0x7f488b68a610)')
>>called
>> at /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 250\n\tEPrints::DataObj::EPM::new('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'irstats2') called at
>> /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 232\n\tEPrints::DataObj::EPM::map('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'CODE(0x7f488b4d0b30)')
>>called
>> at
>> 
>>/usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM/Available.pm
>> line
>> 
>>326\n\tEPrints::Plugin::Screen::Admin::EPM::Available::render_results('EP
>>ri
>> nts::Plugin::Screen::Admin::EPM::Available=HASH(0x7f488b4...') called at
>> 
>>/usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM/Available.pm
>> line
>> 
>>285\n\tEPrints::Plugin::Screen::Admin::EPM::Available::render('EPrints::P
>>lu
>> gin::Screen::Admin::EPM::Available=HASH(0x7f488b4...') called at
>> /usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM.pm line
>> 
>>149\n\tEPrints::Plugin::Screen::Admin::EPM::render('EPrints::Plugin::Scre
>>en
>> ::Admin::EPM=HASH(0x7f488b4a2410)') called at
>> /usr/share/eprints3/perl_lib/EPrints/ScreenProcessor.pm line
>> 377\n\tEPrints::ScreenProcessor::process('EPrints::ScreenProcessor',
>> 'session', 'EPrints::Repository=HASH(0x7f488b693dd8)', 'template',
>>undef,
>> 'url', '/cgi/users/home') called at /usr/share/eprints3/cgi/users/home
>> line
>> 
>>25\n\tModPerl::ROOT::ModPerl::Registry::usr_share_eprints3_cgi_users_home
>>::
>> handler('Apache2::RequestRec=SCALAR(0x7f488f751a10)') called at
>> /usr/lib/perl5/ModPerl/RegistryCooker.pm line 204\n\teval {...} called
>>at
>> /usr/lib/perl5/ModPerl/RegistryCooker.pm line
>> 
>>204\n\tModPerl::RegistryCooker::run('ModPerl::Registry=HASH(0x7f488f86ab7
>>0)
>> ') called at /usr/lib/perl5/ModPerl/RegistryCooker.pm line
>> 
>>170\n\tModPerl::RegistryCooker::default_handler('ModPerl::Registry=HASH(0
>>x7
>> f488f86ab70)') called at /usr/lib/perl5/ModPerl/Registry.pm line
>> 31\n\tModPerl::Registry::handler('ModPerl::Registry',
>> 'Apache2::RequestRec=SCALAR(0x7f488f751a10)') called at -e line
>>0\n\teval
>> {...} called at -e line 0\n at /usr/lib/perl5/XML/LibXML/SAX.pm line
>> 109\n\tXML::LibXML::SAX::_parse('XML::LibXML::SAX=HASH(0x7f488b4c3d58)')
>> called at /usr/lib/perl5/XML/LibXML/SAX.pm line
>> 
>>54\n\tXML::LibXML::SAX::_parse_bytestream('XML::LibXML::SAX=HASH(0x7f488b
>>4c
>> 3d58)', 'GLOB(0x7f488b68a610)') called at
>> /usr/share/eprints3/perl_lib/XML/SAX/Base.pm line
>> 2602\n\tXML::SAX::Base::parse('XML::LibXML::SAX=HASH(0x7f488b4c3d58)',
>> 'HASH(0x7f488b479630)') called at
>> /usr/share/eprints3/perl_lib/XML/SAX/Base.pm line
>> 
>>2631\n\tXML::SAX::Base::parse_file('XML::LibXML::SAX=HASH(0x7f488b4c3d58)
>>',
>>   'GLOB(0x7f488b68a610)') called at
>> /usr/share/eprints3/perl_lib/EPrints/XML/LibXML.pm line
>> 137\n\tEPrints::XML::event_parse('GLOB(0x7f488b68a610)',
>> 'EPrints::DataObj::SAX::Handler=ARRAY(0x7f488b4d4370)') called at
>> /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 293\n\tEPrints::DataObj::EPM::new_from_file('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'GLOB(0x7f488b68a610)')
>>called
>> at /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 250\n\tEPrints::DataObj::EPM::new('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'irstats2') called at
>> /usr/share/eprints3/perl_lib/EPrints/DataObj/EPM.pm line
>> 232\n\tEPrints::DataObj::EPM::map('EPrints::DataObj::EPM',
>> 'EPrints::Repository=HASH(0x7f488b693dd8)', 'CODE(0x7f488b4d0b30)')
>>called
>> at
>> 
>>/usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM/Available.pm
>> line
>> 
>>326\n\tEPrints::Plugin::Screen::Admin::EPM::Available::render_results('EP
>>ri
>> nts::Plugin::Screen::Admin::EPM::Available=HASH(0x7f488b4...') called at
>> 
>>/usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM/Available.pm
>> line
>> 
>>285\n\tEPrints::Plugin::Screen::Admin::EPM::Available::render('EPrints::P
>>lu
>> gin::Screen::Admin::EPM::Available=HASH(0x7f488b4...') called at
>> /usr/share/eprints3/perl_lib/EPrints/Plugin/Screen/Admin/EPM.pm line
>> 
>>149\n\tEPrints::Plugin::Screen::Admin::EPM::render('EPrints::Plugin::Scre
>>en
>> ::Admin::EPM=HASH(0x7f488b4a2410)') called at
>> /usr/share/eprints3/perl_lib/EPrints/ScreenProcessor.pm line
>> 377\n\tEPrints::ScreenProcessor::process('EPrints::ScreenProcessor',
>> 'session', 'EPrints::Repository=HASH(0x7f488b693dd8)', 'template',
>>undef,
>> 'url', '/cgi/users/home') called at /usr/share/eprints3/cgi/users/home
>> line
>> 
>>25\n\tModPerl::ROOT::ModPerl::Registry::usr_share_eprints3_cgi_users_home
>>::
>> handler('Apache2::RequestRec=SCALAR(0x7f488f751a10)') called at
>> /usr/lib/perl5/ModPerl/RegistryCooker.pm line 204\n\teval {...} called
>>at
>> /usr/lib/perl5/ModPerl/RegistryCooker.pm line
>> 
>>204\n\tModPerl::RegistryCooker::run('ModPerl::Registry=HASH(0x7f488f86ab7
>>0)
>> ') called at /usr/lib/perl5/ModPerl/RegistryCooker.pm line
>> 
>>170\n\tModPerl::RegistryCooker::default_handler('ModPerl::Registry=HASH(0
>>x7
>> f488f86ab70)') called at /usr/lib/perl5/ModPerl/Registry.pm line
>> 31\n\tModPerl::Registry::handler('ModPerl::Registry',
>> 'Apache2::RequestRec=SCALAR(0x7f488f751a10)') called at -e line
>>0\n\teval
>> {...} called at -e line 0\n
>>
>> Which is pretty much error soup to me. Can anyone make head or tail as
>>to
>> what¹s going on? I think it¹s a result of a bad update that was
>>performed
>> last year which brought our system down for a few days (while I was on
>> leave, no less!) as that was when the problems seemed to start.
>>
>>
>> On 18/02/2015 14:30, "Andrew Beeken" <anbeeken@lincoln.ac.uk> wrote:
>>
>>> Hello all!
>>>
>>> Currently trying to use the command line install for our bazaar as the
>>> GUI is broken - I¹ve found the instructions here
>>> http://wiki.eprints.org/w/EPrints_Package_Manager but they seem to be
>>>out
>>> of date as there is no ep_bazaar file in the bin folder. Any thoughts?
>>>
>>> Andrew
>>>
>>> The University of Lincoln, located in the heart of the city of Lincoln,
>>> has established an international reputation based on high student
>>> satisfaction, excellent graduate employment and world-class research.
>>>
>>> The information in this e-mail and any attachments may be confidential.
>>> If you have received this email in error please notify the sender
>>> immediately and remove it from your system. Do not disclose the
>>>contents
>>> to another person or take copies.
>>>
>>> Email is not secure and may contain viruses. The University of Lincoln
>>> makes every effort to ensure email is sent without viruses, but cannot
>>> guarantee this and recommends recipients take appropriate precautions.
>>>
>>> The University may monitor email traffic data and content in accordance
>>> with its policies and English law. Further information can be found at:
>>> http://www.lincoln.ac.uk/legal.
>>>
>>> *** Options: 
>>>http://mailman.ecs.soton.ac.uk/mailman/listinfo/eprints-tech
>>> *** Archive: http://www.eprints.org/tech.php/
>>> *** EPrints community wiki: http://wiki.eprints.org/
>>> *** EPrints developers Forum: http://forum.eprints.org/
>>
>> *** Options: 
>>http://mailman.ecs.soton.ac.uk/mailman/listinfo/eprints-tech
>> *** Archive: http://www.eprints.org/tech.php/
>> *** EPrints community wiki: http://wiki.eprints.org/
>> *** EPrints developers Forum: http://forum.eprints.org/
>>
>
>-- 
>Peter J. West
>Digital Repository Services Ltd
>
>
>*** Options: http://mailman.ecs.soton.ac.uk/mailman/listinfo/eprints-tech
>*** Archive: http://www.eprints.org/tech.php/
>*** EPrints community wiki: http://wiki.eprints.org/
>*** EPrints developers Forum: http://forum.eprints.org/